Tissue expression of ABCA7 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	5.1	TPM
GTEx:	13.2	RPKM
FANTOM5:	7.8	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Low

Antibody staining	Antibody HPA041564
Glandular cells	Low

SMALL INTESTINE - HPA RNA-seq

Average TPM	5.1

Male, age 65

Sample 1
TPM: 4.7

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 5.2

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 6.2

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 4.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	13.2

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 13.2

Samples: 88

Max RPKM: 90.0
Min RPKM: 1.1
Std RPKM: 14.4
Median RPKM: 7.6

GTEX-VUSG-1726-SM-4KKZL

50-59 years, male

90.0

GTEX-UPK5-2026-SM-4JBIM

40-49 years, male

61.1

GTEX-ZC5H-2326-SM-4WAYT

40-49 years, female

53.0

GTEX-11XUK-1426-SM-5EQMG

40-49 years, female

39.8

GTEX-11NSD-1726-SM-5N9C3

20-29 years, male

36.1

GTEX-WFJO-0926-SM-4LVM2

30-39 years, male

36.1

GTEX-13O61-1326-SM-5KM31

60-69 years, male

35.2

GTEX-WH7G-1626-SM-4LVMY

40-49 years, male

33.2

GTEX-Z9EW-0926-SM-5CVMM

40-49 years, male

31.1

GTEX-ZLFU-1526-SM-4WWBT

40-49 years, male

30.8

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	7.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 7.8

FF:10024-101D6

15,40,85 years, mixed

7.8