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ASB1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.5TPM
GTEx:7.2RPKM
FANTOM5:11.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
 

Antibody staining

Antibody HPA003508

  

Endothelial cells

 Low  

Glandular cells

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

4.5
overview Male, age 54 Sample 1
TPM: 5.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 8.3
Samples: 149

Max RPKM: 12.7
Min RPKM: 4.8
Std RPKM: 1.5
Median RPKM: 8.2
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 12.7
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 12.0
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 12.0
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 11.4
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 11.4
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 11.3
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 11.2
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 11.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 11.2
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 11.2
Show all
Colon - Transverse
RPKM: 6.3
Samples: 196

Max RPKM: 11.6
Min RPKM: 2.4
Std RPKM: 1.7
Median RPKM: 5.9
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 11.6
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 11.3
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 10.8
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 10.6
GTEX-11GSP-1626-SM-5986N 60-69 years, female 10.5
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 10.5
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 10.3
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 9.9
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 9.8
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 9.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

11.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 11.3
FF:10014-101C5 62,83,84 years, mixed 11.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.