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FAM107B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:64.2TPM
GTEx:7.4RPKM
FANTOM5:45.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA039661

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 

COLON - HPA RNA-seq

Average TPM

64.2
overview Male, age 54 Sample 1
TPM: 48.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 36.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 99.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 76.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 38.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 40.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 76.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 47.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 51.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 98.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 74.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 70.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 75.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.0
Samples: 149

Max RPKM: 12.0
Min RPKM: 1.3
Std RPKM: 2.0
Median RPKM: 4.7
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 12.0
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 11.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 10.3
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 10.2
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 9.6
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 9.5
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 9.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 9.1
GTEX-145LS-2926-SM-5O99G 60-69 years, female 8.9
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 8.4
Show all
Colon - Transverse
RPKM: 9.1
Samples: 196

Max RPKM: 60.2
Min RPKM: 2.1
Std RPKM: 5.1
Median RPKM: 8.9
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 60.2
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 26.5
GTEX-144GM-1226-SM-5LU52 20-29 years, male 20.8
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 18.1
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 16.9
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 16.8
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 15.9
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 15.9
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 15.8
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 15.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

45.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 45.0
FF:10014-101C5 62,83,84 years, mixed 45.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.