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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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ME1
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

ME1

Gene description

Malic enzyme 1, NADP(+)-dependent, cytosolic

Protein class

Enzymes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (CACO-2)
HPA (normal tissue):Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in several tissues, most abundant in adrenal gland.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Approved based on 1 antibody.
HPA006493
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PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (unfavourable) and liver cancer (unfavourable).
Renal cancer p<0.001
Liver cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA006493

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Strong cytoplasmic immunoreactivity was observed in a few cases of gastric, liver and urothelial cancers. Most other cancer tissues were negative.

GENE INFORMATION

Gene name

ME1

Synonyms

Description

Malic enzyme 1, NADP(+)-dependent, cytosolic (HGNC Symbol)

Entrez gene summary

This gene encodes a cytosolic, NADP-dependent enzyme that generates NADPH for fatty acid biosynthesis. The activity of this enzyme, the reversible oxidative decarboxylation of malate, links the glycolytic and citric acid cycles. The regulation of expression for this gene is complex. Increased expression can result from elevated levels of thyroid hormones or by higher proportions of carbohydrates in the diet. [provided by RefSeq, Jul 2008]

Chromosome

6

Cytoband

q14.2

Chromosome location (bp)

83210389 - 83431071

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000065833 (version 83.38)

Entrez gene

4199

UniProt

P48163 (UniProt - Evidence at protein level)

neXtProt

NX_P48163

Antibodypedia

ME1 antibodies

PROTEIN BROWSER

ME1-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ME1-001
ENSP00000358719
ENST00000369705
P48163 [Direct mapping]
NADP-dependent malic enzyme
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Enzymes
   ENZYME proteins
   Oxidoreductases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004470 [malic enzyme activity]
GO:0004471 [malate dehydrogenase (decarboxylating) (NAD+) activity]
GO:0004473 [malate dehydrogenase (decarboxylating) (NADP+) activity]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0005975 [carbohydrate metabolic process]
GO:0006108 [malate metabolic process]
GO:0006741 [NADP biosynthetic process]
GO:0008948 [oxaloacetate decarboxylase activity]
GO:0009055 [electron carrier activity]
GO:0009725 [response to hormone]
GO:0009743 [response to carbohydrate]
GO:0030145 [manganese ion binding]
GO:0043531 [ADP binding]
GO:0044255 [cellular lipid metabolic process]
GO:0044281 [small molecule metabolic process]
GO:0050661 [NADP binding]
GO:0051262 [protein tetramerization]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
GO:1902031 [regulation of NADP metabolic process]
Show all
572 aa
64.1 kDa
No 0

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