We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PKM
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:223.4TPM
GTEx:103.4RPKM
FANTOM5:458.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA029501

 

Antibody CAB019421

 

Adipocytes

Not detected   Not detected  

Glandular cells

Medium   Low  

Myoepithelial cells

Medium   Low  
   
   
   

BREAST - HPA RNA-seq

Average TPM

223.4

overview Female, age 52 Sample 1
TPM: 205.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 258.9
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 270.3
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 158.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

103.4

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 103.4
Samples: 214

Max RPKM: 324.8
Min RPKM: 28.7
Std RPKM: 43.5
Median RPKM: 99.1
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 324.8
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 274.0
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 248.3
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 211.5
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 206.8
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 192.0
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 183.8
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 183.6
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 177.5
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 175.4
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 173.9
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 172.2
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 167.6
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 167.3
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 166.0
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 162.3
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 161.6
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 159.7
GTEX-QEL4-2126-SM-447AE 50-59 years, male 159.1
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 158.7
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 158.4
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 158.2
GTEX-S341-1526-SM-4AD6K 40-49 years, female 153.2
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 152.7
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 152.7
GTEX-XBED-1626-SM-47JYN 60-69 years, male 152.6
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 152.4
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 150.3
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 150.0
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 147.4
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 146.7
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 145.6
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 143.7
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 143.4
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 142.6
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 141.6
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 138.1
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 137.3
GTEX-T6MN-0726-SM-32PML 50-59 years, male 137.1
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 136.8
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 136.3
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 135.3
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 134.7
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 134.2
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 133.0
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 131.9
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 130.5
GTEX-X261-0626-SM-3NMD9 50-59 years, male 129.7
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 129.3
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 128.6
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 128.1
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 127.1
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 126.4
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 125.9
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 125.9
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 125.0
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 124.2
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 124.1
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 123.8
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 123.6
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 122.3
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 122.2
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 121.9
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 121.1
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 120.9
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 120.4
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 120.1
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 120.0
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 118.9
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 117.9
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 117.7
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 117.4
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 117.2
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 117.0
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 116.8
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 116.7
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 116.3
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 116.3
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 116.1
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 116.1
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 115.0
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 114.9
GTEX-11EI6-0626-SM-5985T 60-69 years, male 112.8
GTEX-1122O-1226-SM-5H113 60-69 years, female 112.4
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 111.4
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 111.3
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 110.4
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 110.3
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 109.4
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 109.2
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 108.5
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 107.8
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 107.5
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 105.8
GTEX-1192X-2326-SM-5987X 50-59 years, male 105.7
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 105.7
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 105.6
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 105.3
GTEX-WFON-1826-SM-3GILG 40-49 years, male 104.1
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 103.0
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 102.9
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 102.1
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 101.7
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 101.5
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 101.2
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 99.5
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 99.2
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 99.1
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 99.0
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 98.9
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 98.5
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 98.4
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 98.3
GTEX-111YS-1926-SM-5GICC 60-69 years, male 97.1
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 97.0
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 96.2
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 95.8
GTEX-QVJO-1826-SM-447C9 60-69 years, female 94.9
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 94.5
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 94.0
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 93.6
GTEX-RU72-0626-SM-46MUI 50-59 years, female 93.5
GTEX-11P81-1926-SM-5BC53 30-39 years, female 93.3
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 93.2
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 92.2
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 92.2
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 91.4
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 90.3
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 90.0
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 89.3
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 89.2
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 89.0
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 88.0
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 87.8
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 86.2
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 85.6
GTEX-13113-1726-SM-5GCOO 60-69 years, female 85.6
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 85.5
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 85.0
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 84.6
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 84.5
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 84.4
GTEX-TML8-1226-SM-32QON 40-49 years, female 84.1
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 83.6
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 82.7
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 81.1
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 80.4
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 78.1
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 78.1
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 77.5
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 77.3
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 76.7
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 76.2
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 76.1
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 75.3
GTEX-11OF3-1926-SM-59889 60-69 years, male 75.1
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 75.0
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 74.8
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 72.4
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 71.6
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 71.2
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 70.8
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 69.7
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 69.5
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 67.9
GTEX-R53T-1526-SM-48FEK 50-59 years, female 66.4
GTEX-117YX-1426-SM-5H12H 50-59 years, male 66.1
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 65.1
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 64.9
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 64.2
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 64.0
GTEX-REY6-2426-SM-48FF5 60-69 years, male 63.7
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 63.5
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 63.4
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 63.3
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 62.5
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 61.9
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 61.4
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 61.4
GTEX-R55D-0826-SM-48FEA 50-59 years, male 61.0
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 59.7
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 58.5
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 58.2
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 58.2
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 58.2
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 58.0
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 57.5
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 57.1
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 54.8
GTEX-117XS-1926-SM-5GICO 60-69 years, male 54.4
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 54.0
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 52.4
GTEX-144GM-0926-SM-5O994 20-29 years, male 52.2
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 51.8
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 49.5
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 49.1
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 48.2
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 47.7
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 47.0
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 46.4
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 43.8
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 43.6
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 43.3
GTEX-14753-2426-SM-5LU8U 60-69 years, male 42.2
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 40.2
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 39.8
GTEX-11P82-1326-SM-5HL62 20-29 years, male 38.4
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 37.8
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 37.7
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 35.7
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 35.4
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 34.5
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 33.6
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 28.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

458.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 458.9
FF:10080-102A8 77 years, female 458.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.