Fields »
ABOUT
HELP
BLOG
INPP5A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:23.1TPM
GTEx:14.7RPKM
FANTOM5:75.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA012285

  

Endothelial cells

 High  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

23.1
overview Male, age 54 Sample 1
TPM: 16.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 29.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 25.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 23.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 22.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 51.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 16
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 29.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 15.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 20.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 22.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 16.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 18.3
Samples: 149

Max RPKM: 35.0
Min RPKM: 3.6
Std RPKM: 6.4
Median RPKM: 17.7
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 35.0
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 33.7
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 30.6
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 29.9
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 29.8
GTEX-13111-1926-SM-5GCOL 50-59 years, male 29.5
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 29.4
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 29.2
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 29.2
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 29.0
Show all
Colon - Transverse
RPKM: 12.0
Samples: 196

Max RPKM: 32.9
Min RPKM: 3.1
Std RPKM: 6.8
Median RPKM: 9.7
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 32.9
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 31.1
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 29.7
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 29.7
GTEX-Y114-1526-SM-4TT79 50-59 years, female 27.8
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 27.6
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 27.5
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 27.1
GTEX-S341-1426-SM-4AD6U 40-49 years, female 26.6
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 25.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

75.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 75.0
FF:10014-101C5 62,83,84 years, mixed 75.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.