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Gene name

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Validation

Method

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Method

Validation

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Score

Score

Score

Antibodies

Column

 
 
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PABPC1
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

309.3 FPKM 247.1 FPKM

3-year survival high

22% 27%

3-year survival low

44% 39%

Log-rank P value

5.70e-2 9.73e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

282.8

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 1094.8
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 953.3
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 907.4
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 854.9
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 639.9
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 609.0
TCGA-ER-A196-01A 64 years, female, white, stage:iic 539.5
TCGA-ER-A42H-01A 77 years, male, white 473.3
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 448.3
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 432.9
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 425.1
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 420.0
TCGA-EB-A24C-01A 56 years, male, white 409.2
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 404.8
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 401.1
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 395.5
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 392.5
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 388.7
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 381.7
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 365.1
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 362.6
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 357.8
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 353.1
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 348.1
TCGA-EB-A431-01A 34 years, male, white, stage:iic 345.7
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 344.8
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 343.4
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 343.1
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 341.6
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 335.5
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 332.0
TCGA-EB-A550-01A 75 years, female, white, stage:iic 325.5
TCGA-EB-A299-01A 63 years, male, white, stage:iia 324.7
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 322.1
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 313.6
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 310.3
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 308.2
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 305.6
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 303.2
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 289.0
TCGA-HR-A5NC-01A 90 years, female 284.9
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 275.5
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 275.1
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 274.2
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 267.2
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 261.5
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 257.2
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 256.1
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 255.7
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 254.5
TCGA-GF-A769-01A 39 years, male, white, stage:iic 250.3
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 243.9
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 227.3
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 222.9
TCGA-FR-A726-01A 90 years, male, white, stage:iic 216.5
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 214.7
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 211.9
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 210.7
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 208.7
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 207.1
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 206.5
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 206.0
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 202.3
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 200.7
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 195.8
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 195.1
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 189.5
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 189.1
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 188.3
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 187.6
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 186.3
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 185.6
TCGA-YG-AA3N-01A 67 years, male, stage:iic 184.1
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 176.8
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 176.6
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 175.5
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 174.6
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 173.7
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 172.1
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 171.3
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 171.1
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 166.6
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 165.1
TCGA-GN-A263-01A 24 years, male, white, stage:iv 165.1
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 164.3
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 152.9
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 150.5
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 144.3
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 142.9
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 142.8
TCGA-DA-A960-01A 73 years, male, white, stage:iib 134.9
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 133.9
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 133.8
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 117.3
TCGA-ER-A194-01A 77 years, male, white 91.0
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 87.7
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 86.3
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 86.1
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 82.5
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 63.8
TCGA-EB-A553-01A 62 years, male, white, stage:iic 61.4
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 47.5
Show all

MELANOMA - Protein expression

 

Antibody HPA045423

Antibody CAB011536

 Antibody staining
  High
  Medium
  Low
  Not detected
   
 Intensity
  Strong
  Moderate
  Weak
  Negative
   
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
   
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
   

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