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CDC42

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:192.8TPM
GTEx:49.7RPKM
FANTOM5:197.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody CAB004360

  

Endothelial cells

 Medium  

Glandular cells

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

192.8
overview Male, age 54 Sample 1
TPM: 157.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 205.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 224.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 252.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 183.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 202.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 217.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 169.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 177.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 180.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 202.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 192.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 140.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

49.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 44.4
Samples: 149

Max RPKM: 63.8
Min RPKM: 33.0
Std RPKM: 5.8
Median RPKM: 44.0
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 63.8
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 62.1
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 60.7
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 57.9
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 55.6
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 55.0
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 54.4
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 53.6
GTEX-XBED-1726-SM-47JYO 60-69 years, male 53.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 53.4
Show all
Colon - Transverse
RPKM: 53.7
Samples: 196

Max RPKM: 88.4
Min RPKM: 34.1
Std RPKM: 9.7
Median RPKM: 53.0
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 88.4
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 79.0
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 78.9
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 78.9
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 76.0
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 75.8
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 74.7
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 74.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 74.0
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 74.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

197.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 197.9
FF:10014-101C5 62,83,84 years, mixed 197.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.