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MS4A12

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:239.6TPM
GTEx:45.9RPKM
FANTOM5:5.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA057657

  

Endothelial cells

 Not detected  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

239.6
overview Male, age 54 Sample 1
TPM: 127
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 249.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 50.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 793.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 182.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 116.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 135.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 309.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 181
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 109.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 345.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 272.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 241.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

45.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.5
Samples: 149

Max RPKM: 10.0
Min RPKM: 0.0
Std RPKM: 1.5
Median RPKM: 0.0
GTEX-V955-1726-SM-4JBHF 60-69 years, male 10.0
GTEX-XBED-1726-SM-47JYO 60-69 years, male 9.9
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 9.4
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 5.3
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 5.1
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 4.0
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 3.4
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 2.8
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 2.4
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 2.2
Show all
Colon - Transverse
RPKM: 80.5
Samples: 196

Max RPKM: 432.2
Min RPKM: 0.0
Std RPKM: 94.9
Median RPKM: 51.7
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 432.2
GTEX-144GM-1226-SM-5LU52 20-29 years, male 422.1
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 389.3
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 354.4
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 343.3
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 314.1
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 287.2
GTEX-TKQ2-1326-SM-4DXT9 50-59 years, male 280.7
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 280.7
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 260.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

5.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 5.6
FF:10014-101C5 62,83,84 years, mixed 5.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.