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CYBRD1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:50.3TPM
GTEx:39.1RPKM
FANTOM5:441.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA014757

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

50.3
overview Male, age 54 Sample 1
TPM: 46.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 34.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 89.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 37.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 43.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 55.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 36.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 59.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 27
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 55.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 82.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 72.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

39.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 46.1
Samples: 149

Max RPKM: 122.1
Min RPKM: 14.7
Std RPKM: 18.0
Median RPKM: 43.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 122.1
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 110.9
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 108.5
GTEX-145LS-2926-SM-5O99G 60-69 years, female 98.5
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 79.5
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 78.3
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 78.0
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 77.1
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 76.2
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 73.5
Show all
Colon - Transverse
RPKM: 33.7
Samples: 196

Max RPKM: 207.6
Min RPKM: 7.0
Std RPKM: 27.3
Median RPKM: 23.7
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 207.6
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 121.8
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 121.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 119.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 115.3
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 108.0
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 106.3
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 94.8
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 92.3
GTEX-S341-1426-SM-4AD6U 40-49 years, female 91.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

441.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 441.3
FF:10014-101C5 62,83,84 years, mixed 441.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.