We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RDH11
  • premium

    TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:97.9TPM
GTEx:28.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody CAB046011

 

Endothelial cells

Not detected  

Glial cells

Not detected  

Neuronal cells

Not detected  

Neuropil

Not detected  
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

97.9

N/A Male, age 5 Sample 1
TPM: 86.7
overview Female, age 40 Sample 2
TPM: 99.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 107
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

28.7

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 25.4
Samples: 114

Max RPKM: 41.3
Min RPKM: 10.6
Std RPKM: 4.4
Median RPKM: 25.4
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 41.3
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 35.0
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 34.3
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 33.1
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 32.6
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 32.3
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 31.7
GTEX-X585-3026-SM-46MWF 50-59 years, male 31.7
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 31.6
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 31.2
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 31.1
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 30.8
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 30.7
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 30.2
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 30.1
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 29.8
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 29.4
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 29.3
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 29.2
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 29.2
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 28.6
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 28.5
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 28.5
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 28.4
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 28.4
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 28.4
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 28.2
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 28.0
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 28.0
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 27.8
GTEX-11GSP-3226-SM-5986O 60-69 years, female 27.7
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 27.6
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 27.6
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 27.5
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 27.4
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 27.3
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 27.3
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 27.2
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 27.2
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 27.1
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 27.1
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 27.0
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 26.9
GTEX-WL46-2926-SM-3LK82 50-59 years, male 26.6
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 26.6
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 26.4
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 26.3
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 26.2
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 26.1
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 26.1
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 26.0
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 26.0
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 25.9
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 25.7
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 25.7
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 25.6
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 25.5
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 25.4
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 25.3
GTEX-145MF-2726-SM-5O995 50-59 years, male 25.3
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 25.3
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 25.3
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 25.3
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 25.2
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 25.2
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 25.2
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 25.1
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 25.1
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 25.0
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 25.0
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 24.5
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 24.4
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 24.3
GTEX-1128S-2726-SM-5H12C 60-69 years, female 24.2
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 24.2
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 24.1
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 24.0
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 24.0
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 24.0
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 24.0
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 23.9
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 23.9
GTEX-11PRG-2926-SM-5987A 50-59 years, male 23.7
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 23.6
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 23.5
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 23.4
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 23.3
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 23.1
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 23.0
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 22.5
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 22.2
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 22.2
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 22.1
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 22.0
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 22.0
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 21.9
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 21.9
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 21.9
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 21.5
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 21.4
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 21.0
GTEX-144FL-3026-SM-5O99C 50-59 years, male 20.1
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 19.6
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 19.6
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 19.2
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 18.7
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 18.4
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 17.6
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 17.3
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 16.6
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 16.1
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 14.7
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 12.4
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 10.6
Show all
Brain - Frontal Cortex (BA9)
RPKM: 32.2
Samples: 108

Max RPKM: 47.4
Min RPKM: 16.2
Std RPKM: 6.6
Median RPKM: 32.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 47.4
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 46.0
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 45.8
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 44.4
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 44.0
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 43.8
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 43.6
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 43.5
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 41.8
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 41.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 41.2
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 40.9
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 40.0
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 39.8
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 39.7
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 39.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 39.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 38.8
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 38.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 38.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 38.5
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 37.7
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 37.6
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 37.2
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 37.2
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 37.0
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 36.9
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 36.8
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 36.3
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 36.2
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 36.1
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 35.7
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 35.7
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 35.3
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 34.9
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 34.8
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 34.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 34.1
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 34.0
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 33.9
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 33.9
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 33.9
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 33.8
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 33.7
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 33.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 33.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 33.2
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 33.2
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 33.1
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 32.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 32.7
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 32.7
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 32.6
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 32.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 32.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 32.1
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 32.1
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 32.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 31.7
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 31.6
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 31.6
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 31.3
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 31.3
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 31.3
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 31.2
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 30.8
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 30.7
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 30.2
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 30.0
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 29.9
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 29.8
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 29.7
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 29.5
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 29.5
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 29.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 29.3
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 29.0
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 28.8
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 28.7
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 28.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 28.3
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 28.2
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 27.5
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 27.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 27.1
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 26.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 26.5
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 26.5
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 25.4
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 25.4
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 25.0
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 24.8
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 24.6
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 24.2
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 24.0
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 23.9
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 23.7
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 22.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 22.2
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 21.9
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 21.7
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 21.5
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 21.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 20.7
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 19.2
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 18.1
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 17.6
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 16.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.