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MPP5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.8TPM
GTEx:5.4RPKM
FANTOM5:32.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
 

Antibody staining

Antibody HPA000993

  

Endothelial cells

 Not detected  

Glandular cells

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

13.8
overview Male, age 54 Sample 1
TPM: 17.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 15
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 17.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 8.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 10.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 15.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 17.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.6
Samples: 149

Max RPKM: 8.3
Min RPKM: 2.7
Std RPKM: 0.8
Median RPKM: 4.5
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 8.3
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 7.8
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 6.6
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 6.5
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 6.3
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 6.2
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 6.2
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 6.0
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 5.9
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 5.7
Show all
Colon - Transverse
RPKM: 6.1
Samples: 196

Max RPKM: 11.3
Min RPKM: 3.0
Std RPKM: 1.7
Median RPKM: 5.7
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 11.3
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 11.1
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 11.0
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 10.7
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 10.5
GTEX-R55G-1226-SM-48FDC 40-49 years, female 10.3
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 10.1
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 9.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 9.8
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 9.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

32.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 32.3
FF:10014-101C5 62,83,84 years, mixed 32.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.