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ACADVL

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:144.7TPM
GTEx:198.4RPKM
FANTOM5:265.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA019006

  

Antibody HPA020595

  

Endothelial cells

 Not detected   Low  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Low   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

144.7
overview Male, age 54 Sample 1
TPM: 139.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 75.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 105.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 148.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 64.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 171.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 194.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 126.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 129.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 196
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 169.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 174.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 186.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

198.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 163.9
Samples: 149

Max RPKM: 337.9
Min RPKM: 72.1
Std RPKM: 49.0
Median RPKM: 155.4
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 337.9
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 276.8
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 268.7
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 262.2
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 262.1
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 261.4
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 257.6
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 257.6
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 256.7
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 246.5
Show all
Colon - Transverse
RPKM: 224.6
Samples: 196

Max RPKM: 431.6
Min RPKM: 72.3
Std RPKM: 72.4
Median RPKM: 219.7
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 431.6
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 405.7
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 402.8
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 398.3
GTEX-S7SF-1926-SM-4AT5B 20-29 years, female 385.4
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 382.9
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 375.5
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 356.4
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 352.3
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 352.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

265.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 265.0
FF:10014-101C5 62,83,84 years, mixed 265.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.