We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SDHA
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:105.8TPM
GTEx:67.5RPKM
FANTOM5:153.4Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:High
 

Antibody staining

Antibody HPA041981

 

Antibody CAB034929

 

Bile duct cells

Medium   Not detected  

Hepatocytes

High   Low  
   
   
   

LIVER - HPA RNA-seq

Average TPM

105.8

N/A Female, age 60 Sample 1
TPM: 126.5
overview Male, age 54 Sample 2
TPM: 118.4
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74 Sample 3
TPM: 112.1
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62 Sample 4
TPM: 81.4
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 5
TPM: 80.4
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53 Sample 6
TPM: 94.3
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77 Sample 7
TPM: 91.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72 Sample 8
TPM: 102.6
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70 Sample 9
TPM: 93.3
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23 Sample 10
TPM: 157.3
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

67.5

GTEx sample id

Sample description

RPKM

Liver
RPKM: 67.5
Samples: 119

Max RPKM: 157.7
Min RPKM: 12.6
Std RPKM: 22.0
Median RPKM: 65.6
GTEX-R53T-0326-SM-48FEC 50-59 years, female 157.7
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 132.9
GTEX-13113-1326-SM-5GCOI 60-69 years, female 116.3
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 115.2
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 112.5
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 112.2
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 100.3
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 100.3
GTEX-QESD-2026-SM-447BI 20-29 years, male 98.5
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 98.0
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 95.8
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 95.1
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 92.6
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 91.8
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 91.5
GTEX-QV44-0326-SM-4R1KD 50-59 years, male 90.4
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 90.3
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 89.6
GTEX-P78B-1326-SM-3P611 40-49 years, female 88.8
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 88.6
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 87.9
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 86.2
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 86.1
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 85.0
GTEX-QEL4-1226-SM-447A4 50-59 years, male 84.5
GTEX-UPIC-0926-SM-4IHLV 20-29 years, female 84.0
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 83.2
GTEX-S32W-1926-SM-4AD63 50-59 years, female 83.2
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 83.2
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 82.5
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 81.4
GTEX-Q734-0326-SM-48U15 40-49 years, female 79.4
GTEX-QEG4-1826-SM-4R1JN 30-39 years, male 77.7
GTEX-ZF29-2026-SM-4WWB7 60-69 years, female 76.6
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 76.2
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 75.9
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 75.9
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 74.9
GTEX-XOTO-0826-SM-4B65O 50-59 years, male 74.8
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 73.8
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 73.1
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 71.8
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 71.7
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 70.9
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 70.4
GTEX-1399T-0826-SM-5IFES 60-69 years, male 68.6
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 68.6
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 68.3
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 68.2
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 68.0
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 67.5
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 67.0
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 66.1
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 65.9
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 65.9
GTEX-REY6-1226-SM-48FDR 60-69 years, male 65.7
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 65.7
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 65.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 65.6
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 65.6
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 65.0
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 64.0
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 63.7
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 63.6
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 62.9
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 62.4
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 62.3
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 62.3
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 61.3
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 60.2
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 60.1
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 59.8
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 58.6
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 58.5
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 57.9
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 57.7
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 57.7
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 57.7
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 57.3
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 57.3
GTEX-YECK-1926-SM-4W21H 60-69 years, male 56.9
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 56.4
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 56.1
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 56.0
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 55.0
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 55.0
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 55.0
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 54.2
GTEX-13112-1426-SM-5EGH8 50-59 years, male 53.9
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 53.1
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 52.6
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 52.3
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 52.2
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 52.0
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 51.7
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 50.4
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 50.1
GTEX-12696-0826-SM-5EGGE 60-69 years, male 48.1
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 48.0
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 47.1
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 46.8
GTEX-S33H-1626-SM-4AD68 30-39 years, male 46.7
GTEX-RN64-1826-SM-48FDV 50-59 years, male 46.6
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 46.6
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 46.0
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 46.0
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 45.1
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 44.6
GTEX-11ZUS-2526-SM-59872 30-39 years, male 43.7
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 43.2
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 40.9
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 38.1
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 36.7
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 35.9
GTEX-X261-1726-SM-4PQYT 50-59 years, male 31.3
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 30.5
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 30.4
GTEX-11GSP-0626-SM-5986T 60-69 years, female 25.2
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 12.6
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

153.4

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 153.4
FF:10018-101C9 64,69,70 years, mixed 153.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.