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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:141.6TPM
GTEx:72.5RPKM
FANTOM5:189.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA041981

 

Antibody CAB034929

 

Glandular cells

High   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

141.6

overview Male, age 65 Sample 1
TPM: 161.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 128.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 110.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 166.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

72.5

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 72.5
Samples: 88

Max RPKM: 116.4
Min RPKM: 28.3
Std RPKM: 22.5
Median RPKM: 71.2
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 116.4
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 114.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 112.2
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 111.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 105.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 105.8
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 105.7
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 104.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 102.7
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 102.5
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 101.5
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 101.3
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 99.7
GTEX-1122O-1326-SM-5H11F 60-69 years, female 99.0
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 98.2
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 97.2
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 96.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 96.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 95.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 95.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 94.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 93.2
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 93.0
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 92.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 91.8
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 89.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 86.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 85.9
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 83.0
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 82.9
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 82.8
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 82.6
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 80.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 79.7
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 79.5
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 77.9
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 77.2
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 76.7
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 76.6
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 75.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 74.2
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 72.5
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 72.3
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 72.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 70.0
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 69.5
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 67.4
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 67.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 66.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 66.3
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 66.1
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 64.8
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 63.8
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 63.8
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 63.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 63.0
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 62.6
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 60.6
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 60.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 59.6
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 58.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 58.3
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 57.8
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 57.6
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 57.0
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 56.6
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 56.5
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 53.8
GTEX-13111-1426-SM-5DUW3 50-59 years, male 52.0
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 51.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 50.4
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 49.8
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 49.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 48.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 48.0
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 46.3
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 44.7
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 43.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 43.2
GTEX-117YX-0326-SM-5GICL 50-59 years, male 42.0
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 40.2
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 39.3
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 36.5
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 35.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 35.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 34.2
GTEX-1192X-2526-SM-59868 50-59 years, male 34.0
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 28.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

189.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 189.5
FF:10024-101D6 15,40,85 years, mixed 189.5

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