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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:44.5TPM
GTEx:3.3RPKM
FANTOM5:41.9Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:High
 

Antibody staining

Antibody HPA003916

  

Antibody CAB037318

  

Squamous epithelial cells

 Medium   High  
   
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

44.5
overview Female, age 70 Sample 1
TPM: 40.7
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 53.7
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 39.2
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

3.3

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 3.3
Samples: 286

Max RPKM: 5.4
Min RPKM: 0.9
Std RPKM: 0.8
Median RPKM: 3.4
GTEX-133LE-0626-SM-5IFFJ 20-29 years, female 5.4
GTEX-1399U-1026-SM-5J1OC 50-59 years, female 5.1
GTEX-WEY5-0926-SM-4LMI4 40-49 years, female 5.0
GTEX-13CF3-1626-SM-5IFG9 60-69 years, female 4.9
GTEX-P4QS-0626-SM-3NMD1 60-69 years, male 4.9
GTEX-11EM3-0826-SM-5N9CC 20-29 years, female 4.8
GTEX-13X6H-1326-SM-5LU42 50-59 years, female 4.8
GTEX-145ME-0526-SM-5QGQV 40-49 years, female 4.8
GTEX-TMMY-1126-SM-4DXSX 40-49 years, female 4.8
GTEX-111YS-0926-SM-5EGGI 60-69 years, male 4.7
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

41.9

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 41.9
FF:10015-101C6 68,74,75 years, mixed 41.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.