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SMARCE1

KIDNEY - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.2TPM
GTEx:3.1RPKM
FANTOM5:34.8Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:High
Cells in tubules:High
 

Antibody staining

Antibody HPA003916

  

Antibody CAB037318

  

Cells in glomeruli

 Medium   High  

Cells in tubules

 Medium   High  
   
   
   

KIDNEY - HPA RNA-seq

Average TPM

24.2
overview Female, age 58 Sample 1
TPM: 33.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67 Sample 2
TPM: 29.9
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55 Sample 3
TPM: 27.7
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46 Sample 4
TPM: 26.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57 Sample 5
TPM: 14.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 6
TPM: 18.8
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73 Sample 7
TPM: 6.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59 Sample 8
TPM: 20.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48 Sample 9
TPM: 39
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

3.1

GTEx sample id

Sample description

RPKM
Kidney - Cortex
RPKM: 3.1
Samples: 32

Max RPKM: 4.6
Min RPKM: 1.3
Std RPKM: 0.9
Median RPKM: 3.2
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 4.6
GTEX-QLQW-1626-SM-4R1K1 30-39 years, male 4.6
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 4.4
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 4.2
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 4.0
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 4.0
GTEX-12696-0926-SM-5FQTV 60-69 years, male 3.9
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 3.8
GTEX-RN64-1626-SM-48FD7 50-59 years, male 3.8
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 3.8
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

34.8

FANTOM5 sample id

Sample description

Tags Per Million
Kidney
Tags Per Million: 34.8
FF:10017-101C8 60,62,63 years, female 34.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.