Tissue expression of NCBP3 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	4.7	TPM
GTEx:	8.9	RPKM
FANTOM5:	28.4	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA008959	Antibody HPA013195
Squamous epithelial cells	High	Medium

ESOPHAGUS - HPA RNA-seq

Average TPM	4.7

Female, age 70

Sample 1
TPM: 4.6

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 5.7

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 4

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	8.9

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 8.9

Samples: 286

Max RPKM: 13.6
Min RPKM: 5.7
Std RPKM: 1.3
Median RPKM: 8.8

GTEX-UPIC-1026-SM-4IHLT

20-29 years, female

13.6

GTEX-X585-1226-SM-46MW7

50-59 years, male

13.1

GTEX-R3RS-1326-SM-48FE7

40-49 years, female

13.0

GTEX-11DYG-1326-SM-5N9DO

60-69 years, male

12.9

GTEX-13O1R-1326-SM-5IJF5

60-69 years, male

12.3

GTEX-NPJ8-1926-SM-3MJGB

40-49 years, male

12.2

GTEX-13OVJ-1226-SM-5L3HA

50-59 years, female

11.9

GTEX-12KS4-0926-SM-5BC5S

30-39 years, male

11.8

GTEX-ZF3C-1626-SM-4WWB4

50-59 years, female

11.8

GTEX-QEG5-1426-SM-447AS

20-29 years, male

11.7

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	28.4

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 28.4

FF:10015-101C6

68,74,75 years, mixed

28.4