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MYDGF

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:77.7TPM
GTEx:38.6RPKM
FANTOM5:82.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
 

Antibody staining

Antibody HPA041872

  

Antibody HPA046744

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   Medium  
   
   

COLON - HPA RNA-seq

Average TPM

77.7
overview Male, age 54 Sample 1
TPM: 137
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 83.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 81
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 82.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 95.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 72.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 61.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 58.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 75.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 78.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 76
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 53.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 54.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

38.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 29.7
Samples: 149

Max RPKM: 70.1
Min RPKM: 19.4
Std RPKM: 7.0
Median RPKM: 28.0
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 70.1
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 56.3
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 52.5
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 44.1
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 43.1
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 42.7
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 42.7
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 42.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 42.0
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 41.9
Show all
Colon - Transverse
RPKM: 45.4
Samples: 196

Max RPKM: 121.7
Min RPKM: 16.7
Std RPKM: 18.4
Median RPKM: 42.3
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 121.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 113.4
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 110.9
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 97.2
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 95.3
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 86.2
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 84.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 84.6
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 79.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 79.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

82.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 82.2
FF:10014-101C5 62,83,84 years, mixed 82.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.