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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:36.4TPM
GTEx:31.3RPKM
FANTOM5:46.2Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Low
 

Antibody staining

Antibody HPA041872

  

Antibody HPA046744

  

Squamous epithelial cells

 Low   Low  
   
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

36.4
overview Female, age 70 Sample 1
TPM: 43.6
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 35.5
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 30.3
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

31.3

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 31.3
Samples: 286

Max RPKM: 71.6
Min RPKM: 18.3
Std RPKM: 8.0
Median RPKM: 29.7
GTEX-144GO-2726-SM-5O9A2 60-69 years, male 71.6
GTEX-RUSQ-0826-SM-47JWW 50-59 years, male 63.5
GTEX-R55D-1126-SM-48FEB 50-59 years, male 56.9
GTEX-Q2AH-0826-SM-48TZN 40-49 years, male 52.0
GTEX-ZTX8-0226-SM-5E44D 20-29 years, male 50.9
GTEX-R3RS-1326-SM-48FE7 40-49 years, female 50.7
GTEX-XQ3S-1126-SM-4BOPK 20-29 years, male 50.3
GTEX-13X6I-1026-SM-5LU4C 60-69 years, male 49.2
GTEX-XGQ4-1526-SM-4AT6H 50-59 years, male 48.9
GTEX-11DYG-1326-SM-5N9DO 60-69 years, male 48.0
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

46.2

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 46.2
FF:10015-101C6 68,74,75 years, mixed 46.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.