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MARK3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:25.5TPM
GTEx:16.7RPKM
FANTOM5:54.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA024652

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

25.5
overview Male, age 54 Sample 1
TPM: 24.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 19.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 23
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 22.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 18.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 30.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 25.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 27
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 31.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 29.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 29
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 25
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 26.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

16.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 18.1
Samples: 149

Max RPKM: 29.7
Min RPKM: 13.5
Std RPKM: 2.5
Median RPKM: 17.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 29.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 26.9
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 24.7
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 23.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 23.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 22.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 22.6
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 21.7
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 21.7
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 21.6
Show all
Colon - Transverse
RPKM: 15.6
Samples: 196

Max RPKM: 31.2
Min RPKM: 11.2
Std RPKM: 2.5
Median RPKM: 15.0
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 31.2
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 28.4
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 22.7
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 22.4
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 21.7
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 21.4
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 20.6
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 20.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 19.8
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 19.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

54.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 54.8
FF:10014-101C5 62,83,84 years, mixed 54.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.