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Gene name

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Validation

Method

Validation

Method

Validation

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Expression

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Specificity

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Specificity

Cancer

Specificity

Tissue

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Cell line

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Score

Score

Score

Antibodies

Column

 
 
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RAB7A
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

263.8 FPKM 205.9 FPKM

3-year survival high

0% 44%

3-year survival low

32% 33%

Log-rank P value

2.38e-1 7.65e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

211.8

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-GN-A263-01A 24 years, male, white, stage:iv 509.5
TCGA-HR-A5NC-01A 90 years, female 424.0
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 381.7
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 359.8
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 349.4
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 335.0
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 325.0
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 305.9
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 301.2
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 295.6
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 294.7
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 294.1
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 288.3
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 283.1
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 281.3
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 279.4
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 275.7
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 275.2
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 273.5
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 271.5
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 271.2
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 267.9
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 266.6
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 265.4
TCGA-ER-A194-01A 77 years, male, white 263.9
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 263.8
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 261.6
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 257.7
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 256.7
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 248.8
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 247.6
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 244.9
TCGA-EB-A431-01A 34 years, male, white, stage:iic 244.1
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 242.4
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 237.3
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 237.0
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 232.8
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 230.2
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 229.8
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 227.4
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 226.5
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 225.5
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 222.9
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 222.2
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 219.0
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 218.8
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 218.0
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 217.9
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 217.2
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 207.8
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 206.3
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 205.5
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 205.5
TCGA-FR-A726-01A 90 years, male, white, stage:iic 205.4
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 204.8
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 202.8
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 198.9
TCGA-EB-A550-01A 75 years, female, white, stage:iic 191.4
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 191.3
TCGA-EB-A24C-01A 56 years, male, white 191.0
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 189.1
TCGA-ER-A196-01A 64 years, female, white, stage:iic 188.1
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 185.5
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 183.7
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 182.3
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 182.0
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 172.3
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 171.4
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 171.3
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 170.7
TCGA-YG-AA3N-01A 67 years, male, stage:iic 167.9
TCGA-EB-A553-01A 62 years, male, white, stage:iic 166.8
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 161.8
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 160.6
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 159.7
TCGA-DA-A960-01A 73 years, male, white, stage:iib 159.0
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 158.0
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 157.4
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 151.4
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 147.6
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 146.5
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 145.8
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 144.1
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 143.2
TCGA-ER-A42H-01A 77 years, male, white 140.5
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 137.8
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 136.2
TCGA-EB-A299-01A 63 years, male, white, stage:iia 133.6
TCGA-GF-A769-01A 39 years, male, white, stage:iic 131.9
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 128.4
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 128.3
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 127.7
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 118.3
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 115.1
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 115.1
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 110.3
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 94.6
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 90.3
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 89.2
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 88.3
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 78.7
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 76.8
Show all

MELANOMA - Protein expression

 

Antibody HPA006964

Antibody CAB037131

 Antibody staining
  High
  Medium
  Low
  Not detected
   
 Intensity
  Strong
  Moderate
  Weak
  Negative
   
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
   
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
   

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