Fields »
ABOUT
HELP
BLOG
RAB7A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:146.3TPM
GTEx:89.1RPKM
FANTOM5:215.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA006964

  

Antibody CAB037131

  

Endothelial cells

 Medium   Medium  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Medium   High  
   
   

COLON - HPA RNA-seq

Average TPM

146.3
overview Male, age 54 Sample 1
TPM: 127.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 213.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 227.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 186.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 223.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 142.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 142.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 99.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 99.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 116.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 121.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 113.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 88.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

89.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 85.8
Samples: 149

Max RPKM: 122.9
Min RPKM: 57.8
Std RPKM: 11.3
Median RPKM: 86.0
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 122.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 119.0
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 110.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 108.0
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 105.1
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 104.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 104.0
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 102.8
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 102.3
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 100.3
Show all
Colon - Transverse
RPKM: 91.7
Samples: 196

Max RPKM: 137.1
Min RPKM: 59.4
Std RPKM: 12.9
Median RPKM: 90.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 137.1
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 135.6
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 126.3
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 125.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 125.6
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 122.4
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 117.6
GTEX-117YX-0826-SM-5H11J 50-59 years, male 116.7
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 116.2
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 114.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

215.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 215.3
FF:10014-101C5 62,83,84 years, mixed 215.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.