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EXOSC7

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.0TPM
GTEx:8.8RPKM
FANTOM5:17.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 
 

Antibody staining

Antibody HPA036182

  

Antibody HPA057980

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Medium   Not detected  

Peripheral nerve/ganglion

 Low  
      
   
   
   

COLON - HPA RNA-seq

Average TPM

13.0
overview Male, age 54 Sample 1
TPM: 13.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 10.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 15.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 16.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.1
Samples: 149

Max RPKM: 12.8
Min RPKM: 5.7
Std RPKM: 1.2
Median RPKM: 9.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 12.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 12.2
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 11.8
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 11.6
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 11.6
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 11.3
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 11.3
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 11.2
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 11.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 11.2
Show all
Colon - Transverse
RPKM: 8.5
Samples: 196

Max RPKM: 15.7
Min RPKM: 3.3
Std RPKM: 1.7
Median RPKM: 8.3
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 15.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 13.8
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 12.7
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 12.5
GTEX-1128S-1626-SM-5H12O 60-69 years, female 12.4
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 12.2
GTEX-QMRM-1226-SM-447C6 50-59 years, male 12.2
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 12.0
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 11.9
GTEX-X3Y1-1726-SM-4PQZL 40-49 years, male 11.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

17.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 17.1
FF:10014-101C5 62,83,84 years, mixed 17.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.