We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
FGFR1
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:62.4TPM
GTEx:45.0RPKM
FANTOM5:109.2Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA056402

 

Antibody CAB033614

 

Adipocytes

Not detected   Not detected  

Glandular cells

Low   Medium  

Myoepithelial cells

Not detected   Medium  
   
   
   

BREAST - HPA RNA-seq

Average TPM

62.4

overview Female, age 52 Sample 1
TPM: 70.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 74.8
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 41.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 62.7
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

45.0

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 45.0
Samples: 214

Max RPKM: 106.1
Min RPKM: 19.8
Std RPKM: 12.2
Median RPKM: 44.0
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 106.1
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 80.2
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 78.7
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 75.2
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 75.1
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 75.1
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 70.5
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 68.9
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 68.4
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 66.2
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 65.2
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 64.7
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 64.7
GTEX-R55D-0826-SM-48FEA 50-59 years, male 64.6
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 64.3
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 64.3
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 64.3
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 63.4
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 61.6
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 61.0
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 60.6
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 60.5
GTEX-1122O-1226-SM-5H113 60-69 years, female 60.2
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 59.9
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 58.1
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 57.8
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 57.8
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 57.3
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 57.0
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 56.7
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 56.7
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 56.7
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 56.5
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 56.3
GTEX-RU72-0626-SM-46MUI 50-59 years, female 56.0
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 56.0
GTEX-14753-2426-SM-5LU8U 60-69 years, male 55.8
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 55.8
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 55.7
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 55.6
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 55.2
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 55.2
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 55.2
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 55.2
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 55.2
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 54.5
GTEX-S341-1526-SM-4AD6K 40-49 years, female 54.4
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 54.4
GTEX-XBED-1626-SM-47JYN 60-69 years, male 54.0
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 53.5
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 53.1
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 52.5
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 52.4
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 52.3
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 52.2
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 52.1
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 52.0
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 51.5
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 51.2
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 50.6
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 50.1
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 49.7
GTEX-T6MN-0726-SM-32PML 50-59 years, male 49.3
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 49.1
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 49.0
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 48.8
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 48.6
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 48.5
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 48.5
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 48.3
GTEX-TML8-1226-SM-32QON 40-49 years, female 48.2
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 48.2
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 48.1
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 48.1
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 48.0
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 47.9
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 47.6
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 47.5
GTEX-X261-0626-SM-3NMD9 50-59 years, male 47.3
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 47.3
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 47.2
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 47.0
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 46.9
GTEX-117YX-1426-SM-5H12H 50-59 years, male 46.8
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 46.8
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 46.5
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 46.5
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 46.2
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 46.1
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 45.8
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 45.7
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 45.6
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 45.6
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 45.4
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 45.4
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 45.3
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 45.2
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 45.1
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 45.1
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 44.6
GTEX-11OF3-1926-SM-59889 60-69 years, male 44.4
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 44.4
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 44.4
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 44.3
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 44.3
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 44.2
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 44.1
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 43.9
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 43.8
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 43.7
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 43.6
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 43.4
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 43.2
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 43.0
GTEX-13113-1726-SM-5GCOO 60-69 years, female 42.9
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 42.7
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 42.5
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 42.2
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 42.1
GTEX-11EI6-0626-SM-5985T 60-69 years, male 42.0
GTEX-11P82-1326-SM-5HL62 20-29 years, male 42.0
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 41.8
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 41.8
GTEX-QVJO-1826-SM-447C9 60-69 years, female 41.6
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 41.4
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 41.3
GTEX-REY6-2426-SM-48FF5 60-69 years, male 41.3
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 41.2
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 41.1
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 40.6
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 40.5
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 40.3
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 40.3
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 40.1
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 40.0
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 39.5
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 39.3
GTEX-R53T-1526-SM-48FEK 50-59 years, female 39.3
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 39.3
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 39.2
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 39.2
GTEX-11P81-1926-SM-5BC53 30-39 years, female 39.1
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 38.9
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 38.9
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 38.8
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 38.8
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 38.7
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 38.6
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 38.3
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 38.2
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 38.2
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 38.0
GTEX-144GM-0926-SM-5O994 20-29 years, male 37.9
GTEX-1192X-2326-SM-5987X 50-59 years, male 37.7
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 37.5
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 37.5
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 36.9
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 36.8
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 36.8
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 36.8
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 36.3
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 36.1
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 36.1
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 35.8
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 35.6
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 35.5
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 35.4
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 34.8
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 34.8
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 34.6
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 34.4
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 34.3
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 34.3
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 34.2
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 34.1
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 34.1
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 34.0
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 33.8
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 33.4
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 33.1
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 33.1
GTEX-117XS-1926-SM-5GICO 60-69 years, male 32.8
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 32.8
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 32.7
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 32.5
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 32.0
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 31.8
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 31.3
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 31.2
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 31.0
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 30.9
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 30.9
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 30.8
GTEX-111YS-1926-SM-5GICC 60-69 years, male 29.9
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 29.8
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 29.6
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 29.4
GTEX-WFON-1826-SM-3GILG 40-49 years, male 29.1
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 29.1
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 28.4
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 28.1
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 28.0
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 28.0
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 27.9
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 27.7
GTEX-QEL4-2126-SM-447AE 50-59 years, male 27.6
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 27.5
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 26.8
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 26.4
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 25.9
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 25.6
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 25.5
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 22.7
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 19.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

109.2

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 109.2
FF:10080-102A8 77 years, female 109.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.