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TNS1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:57.2TPM
GTEx:154.8RPKM
FANTOM5:279.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA036089

  

Antibody HPA036090

  

Antibody CAB018774

  

Endothelial cells

 Medium   Medium   High  

Glandular cells

 High   Low   Medium  

Peripheral nerve/ganglion

 Medium   Low  
     
     
     

COLON - HPA RNA-seq

Average TPM

57.2
overview Male, age 54 Sample 1
TPM: 39.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 29.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 9.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 53.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 23.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 189.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 25
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 15.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 131.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 59.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 95.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 59.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

154.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 231.9
Samples: 149

Max RPKM: 368.9
Min RPKM: 104.7
Std RPKM: 58.1
Median RPKM: 227.6
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 368.9
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 358.2
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 357.9
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 335.2
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 330.5
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 325.2
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 324.1
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 323.0
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 320.2
GTEX-13PVR-1726-SM-5Q5EC 60-69 years, female 319.9
Show all
Colon - Transverse
RPKM: 96.2
Samples: 196

Max RPKM: 346.8
Min RPKM: 3.6
Std RPKM: 88.0
Median RPKM: 68.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 346.8
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 303.6
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 291.3
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 282.5
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 281.1
GTEX-11GSP-1626-SM-5986N 60-69 years, female 280.5
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 279.0
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 261.5
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 258.1
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 257.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

279.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 279.5
FF:10014-101C5 62,83,84 years, mixed 279.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.