We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CEACAM1
  • premium

    TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:44.1TPM
GTEx:19.0RPKM
FANTOM5:190.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA011041

 

Antibody CAB002146

 

Glandular cells

Low   Low  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

44.1

overview Male, age 65 Sample 1
TPM: 47.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 38.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 24
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 65.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

19.0

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 19.0
Samples: 88

Max RPKM: 104.4
Min RPKM: 0.9
Std RPKM: 17.0
Median RPKM: 14.4
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 104.4
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 72.9
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 58.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 56.7
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 51.6
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 46.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 42.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 36.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 35.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 33.4
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 33.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 33.0
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 32.2
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 32.1
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 31.7
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 31.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 31.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 31.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 30.9
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 30.4
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 29.8
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 27.4
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 26.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 25.5
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 25.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 25.4
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 24.6
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 24.0
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 23.5
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 22.6
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 22.5
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 21.6
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 20.5
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 20.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 18.6
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 18.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 17.1
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 16.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 16.8
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 16.1
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 15.8
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 15.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 15.0
GTEX-13113-1226-SM-5EGHT 60-69 years, female 14.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 14.2
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 14.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 13.6
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 13.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 12.9
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 12.4
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 12.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 12.2
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 11.7
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 11.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 11.6
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 11.4
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 11.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 10.7
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 10.0
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 9.6
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 9.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 9.2
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 8.8
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 8.6
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 7.2
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 7.0
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 5.6
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 5.3
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 5.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 5.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 4.9
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 4.2
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 4.1
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 3.8
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 3.3
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 3.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 3.1
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 2.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 2.6
GTEX-1192X-2526-SM-59868 50-59 years, male 2.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1.7
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1.7
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1.5
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1.1
GTEX-117YX-0326-SM-5GICL 50-59 years, male 0.9
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

190.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 190.9
FF:10024-101D6 15,40,85 years, mixed 190.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.