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PAFAH1B3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.1TPM
GTEx:8.3RPKM
FANTOM5:9.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
 

Antibody staining

Antibody HPA035639

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

17.1
overview Male, age 54 Sample 1
TPM: 20.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 22.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 28.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 10.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 18.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 19.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 19.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 18.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.5
Samples: 149

Max RPKM: 14.9
Min RPKM: 1.4
Std RPKM: 2.1
Median RPKM: 5.3
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 14.9
GTEX-145LS-2926-SM-5O99G 60-69 years, female 11.4
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 11.4
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 10.5
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 9.7
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 9.2
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 9.2
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 9.1
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 9.0
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 8.9
Show all
Colon - Transverse
RPKM: 10.4
Samples: 196

Max RPKM: 30.1
Min RPKM: 1.8
Std RPKM: 5.2
Median RPKM: 10.2
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 30.1
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 27.3
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 23.4
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 22.8
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 22.4
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 21.3
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 21.3
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 20.5
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 20.3
GTEX-144GN-1126-SM-5LU33 50-59 years, male 20.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

9.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 9.9
FF:10014-101C5 62,83,84 years, mixed 9.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.