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NDC80

SOFT TISSUE - Expression summary

RNA expression
HPA:2.4TPM
GTEx:0.5RPKM
FANTOM5:1.7Tags Per Million

SOFT TISSUE - Annotated protein expression

Pending normal tissue analysis

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

2.4
N/A Female, age 80 Sample 1
TPM: 2.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 1.4
N/A Female, age 57 Sample 3
TPM: 1.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 2.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 0.4
Samples: 350

Max RPKM: 3.3
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.3
GTEX-POMQ-2326-SM-5S2VS 20-29 years, female 3.3
GTEX-113IC-0226-SM-5HL5C 60-69 years, male 2.3
GTEX-SSA3-0226-SM-32QPN 60-69 years, male 1.9
GTEX-Q734-1826-SM-2I3EL 40-49 years, female 1.6
GTEX-139TU-0226-SM-5J1NM 60-69 years, male 1.5
GTEX-PSDG-0326-SM-48TCP 50-59 years, male 1.5
GTEX-1269C-2726-SM-5EGJ4 60-69 years, female 1.3
GTEX-T2IS-0226-SM-32QPH 20-29 years, female 1.3
GTEX-13FTY-0626-SM-5L3F8 40-49 years, female 1.2
GTEX-13N11-2626-SM-5K7UQ 50-59 years, female 1.2
Show all
Adipose - Visceral (Omentum)
RPKM: 0.6
Samples: 227

Max RPKM: 3.0
Min RPKM: 0.0
Std RPKM: 0.5
Median RPKM: 0.5
GTEX-13FHO-2026-SM-5J1OA 60-69 years, male 3.0
GTEX-UPK5-1826-SM-3GAEB 40-49 years, male 3.0
GTEX-ZT9X-0926-SM-5O9C4 40-49 years, male 2.8
GTEX-Y3I4-0726-SM-4TT7M 50-59 years, male 2.6
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 2.0
GTEX-11PRG-1526-SM-5HL6Z 50-59 years, male 1.9
GTEX-11DYG-2026-SM-5EGGX 60-69 years, male 1.7
GTEX-11P81-0726-SM-5PNYH 30-39 years, female 1.7
GTEX-WY7C-0926-SM-3NB34 50-59 years, male 1.7
GTEX-1399T-1326-SM-5PNVH 60-69 years, male 1.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

1.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 1.7
FF:10010-101C1 65,65,76 years, mixed 1.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.