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MEF2C

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:16.0TPM
GTEx:4.3RPKM
FANTOM5:96.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA005533

  

Antibody CAB068196

  

Antibody CAB068197

  

Endothelial cells

 Not detected   High   Medium  

Glandular cells

 Not detected   Low   Not detected  

Peripheral nerve/ganglion

 Not detected   Low  
     
     
     

COLON - HPA RNA-seq

Average TPM

16.0
overview Male, age 54 Sample 1
TPM: 12.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 8.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 21
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 20.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 14.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 19.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 13.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 20.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 21.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.1
Samples: 149

Max RPKM: 10.3
Min RPKM: 2.5
Std RPKM: 1.3
Median RPKM: 5.0
GTEX-145LS-2926-SM-5O99G 60-69 years, female 10.3
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 9.4
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 8.6
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 8.2
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 8.0
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 8.0
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 7.9
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 7.8
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 7.5
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 7.4
Show all
Colon - Transverse
RPKM: 3.8
Samples: 196

Max RPKM: 10.9
Min RPKM: 1.1
Std RPKM: 1.7
Median RPKM: 3.3
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 10.9
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 10.6
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 9.8
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 9.2
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 9.1
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 8.0
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 8.0
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 7.7
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 7.7
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 7.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

96.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 96.7
FF:10014-101C5 62,83,84 years, mixed 96.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.