Tissue expression of ATRX - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	18.2	TPM
GTEx:	6.7	RPKM
FANTOM5:	48.2	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:	High
Fibroblasts:	High
Peripheral nerve:	High
Adipocytes:	Low

Antibody staining	Antibody HPA001906	Antibody CAB009372	Antibody CAB068176
Chondrocytes	High	High	Medium
Fibroblasts	Medium	High	Low
Peripheral nerve	High	High
Adipocytes	High

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Fibroblasts:	High
Peripheral nerve:	High

Antibody staining	Antibody HPA001906	Antibody CAB009372	Antibody CAB068176
Adipocytes	Medium	High	Low
Fibroblasts	Medium	High	Medium
Peripheral nerve	Medium	High	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	18.2

Female, age 80

Sample 1
TPM: 18.9

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 20.6

Female, age 57

Sample 3
TPM: 17

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 17

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 17.4

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	6.7

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 7.1

Samples: 350

Max RPKM: 12.5
Min RPKM: 3.8
Std RPKM: 1.3
Median RPKM: 7.1

GTEX-TSE9-0226-SM-3DB84

60-69 years, female

12.5

GTEX-14C5O-0226-SM-5SI6O

60-69 years, male

11.7

GTEX-SNMC-1326-SM-2XCFK

20-29 years, male

10.7

GTEX-NFK9-0326-SM-3MJGV

40-49 years, male

10.6

GTEX-11WQC-2426-SM-5EQKQ

60-69 years, male

10.5

GTEX-O5YT-0226-SM-32PK5

20-29 years, male

10.5

GTEX-12WSA-0326-SM-5BC6I

60-69 years, male

10.3

GTEX-ZEX8-2326-SM-5S2MN

50-59 years, male

10.3

GTEX-139D8-0326-SM-5IJCJ

30-39 years, female

10.2

GTEX-13NZ9-0526-SM-5J1OX

50-59 years, male

10.1

Show all

Adipose - Visceral (Omentum)
RPKM: 6.2

Samples: 227

Max RPKM: 10.7
Min RPKM: 1.5
Std RPKM: 1.5
Median RPKM: 6.1

GTEX-11NV4-1426-SM-5BC4W

60-69 years, male

10.7

GTEX-11OF3-0826-SM-5BC51

60-69 years, male

9.9

GTEX-113JC-0726-SM-5GZZR

50-59 years, female

9.8

GTEX-WFJO-1026-SM-3GIKL

30-39 years, male

9.7

GTEX-ZAB5-1126-SM-5Q5AD

50-59 years, male

9.3

GTEX-11ZTS-1326-SM-5EQMA

60-69 years, female

9.2

GTEX-145LU-1226-SM-5LU9B

50-59 years, male

9.2

GTEX-YECK-1426-SM-5IFHE

60-69 years, male

9.0

GTEX-14753-2526-SM-5LU97

60-69 years, male

8.9

GTEX-UPK5-1826-SM-3GAEB

40-49 years, male

8.8

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	48.2

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 48.2

FF:10010-101C1

65,65,76 years, mixed

48.2