Tissue expression of ATRX - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	19.6	TPM
GTEx:	7.1	RPKM
FANTOM5:	39.7	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Glandular cells:	High
Myoepithelial cells:	High

Antibody staining	Antibody HPA001906	Antibody CAB009372	Antibody CAB068176
Adipocytes	Medium	High	Medium
Glandular cells	Medium	High	High
Myoepithelial cells	Medium	High	Medium

BREAST - HPA RNA-seq

Average TPM	19.6

Female, age 52

Sample 1
TPM: 18.5

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 15.4

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 21.7

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 22.7

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	7.1

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 7.1

Samples: 214

Max RPKM: 11.7
Min RPKM: 2.6
Std RPKM: 1.7
Median RPKM: 7.0

GTEX-R55F-1726-SM-2TF4R

50-59 years, male

11.7

GTEX-W5X1-2326-SM-3GIL6

40-49 years, female

11.7

GTEX-WYBS-0926-SM-3NM94

60-69 years, female

11.3

GTEX-TMMY-0726-SM-33HBE

40-49 years, female

11.2

GTEX-ZF3C-2326-SM-5S2MZ

50-59 years, female

10.7

GTEX-VJWN-0726-SM-3GIJ8

50-59 years, female

10.6

GTEX-13OW5-2226-SM-5L3HC

60-69 years, male

10.4

GTEX-14753-2426-SM-5LU8U

60-69 years, male

10.4

GTEX-T2YK-2226-SM-32QPT

50-59 years, male

10.3

GTEX-13QIC-2326-SM-5LU5N

60-69 years, female

10.2

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	39.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 39.7

FF:10080-102A8

77 years, female

39.7