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ITPKC

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.8TPM
GTEx:13.9RPKM
FANTOM5:20.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA050760

  

Antibody HPA053003

  

Endothelial cells

 Low   Low  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 High   Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

9.8
overview Male, age 54 Sample 1
TPM: 8.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 8.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 8.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 8.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 11.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 12.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

13.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 13.2
Samples: 149

Max RPKM: 43.7
Min RPKM: 3.5
Std RPKM: 7.1
Median RPKM: 11.4
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 43.7
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 37.7
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 36.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 32.2
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 31.2
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 28.6
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 27.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 27.3
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 26.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 25.2
Show all
Colon - Transverse
RPKM: 14.5
Samples: 196

Max RPKM: 51.0
Min RPKM: 5.3
Std RPKM: 7.2
Median RPKM: 12.6
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 51.0
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 50.4
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 48.3
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 45.0
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 41.9
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 40.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 33.7
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 32.2
GTEX-Y114-1526-SM-4TT79 50-59 years, female 30.8
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 30.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

20.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 20.6
FF:10014-101C5 62,83,84 years, mixed 20.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.