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TMED2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:132.6TPM
GTEx:37.9RPKM
FANTOM5:162.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA014060

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

132.6
overview Male, age 54 Sample 1
TPM: 170.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 127.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 112.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 147.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 96.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 146.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 156
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 122.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 120.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 144.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 160.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 123.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 95.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

37.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 32.3
Samples: 149

Max RPKM: 49.1
Min RPKM: 18.4
Std RPKM: 5.4
Median RPKM: 32.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 49.1
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 45.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 44.3
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 42.3
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 42.3
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 41.9
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 40.7
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 40.7
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 40.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 40.3
Show all
Colon - Transverse
RPKM: 42.2
Samples: 196

Max RPKM: 82.7
Min RPKM: 20.6
Std RPKM: 9.9
Median RPKM: 40.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 82.7
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 78.6
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 77.1
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 76.1
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 66.7
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 65.6
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 63.1
GTEX-144GN-1126-SM-5LU33 50-59 years, male 61.9
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 61.0
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 60.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

162.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 162.1
FF:10014-101C5 62,83,84 years, mixed 162.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.