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CNOT3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.1TPM
GTEx:11.8RPKM
FANTOM5:39.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
 

Antibody staining

Antibody HPA006408

  

Endothelial cells

 Low  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

11.1
overview Male, age 54 Sample 1
TPM: 14.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 8.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 13.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 13.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 12.3
Samples: 149

Max RPKM: 19.9
Min RPKM: 6.7
Std RPKM: 2.2
Median RPKM: 12.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 19.9
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 17.8
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 17.1
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 16.8
GTEX-V955-1726-SM-4JBHF 60-69 years, male 16.7
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 16.5
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 16.2
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 16.2
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 15.8
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 15.7
Show all
Colon - Transverse
RPKM: 11.5
Samples: 196

Max RPKM: 18.8
Min RPKM: 6.3
Std RPKM: 2.2
Median RPKM: 11.3
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 18.8
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 18.5
GTEX-Q734-1126-SM-48TZY 40-49 years, female 18.2
GTEX-139YR-2126-SM-5KM11 50-59 years, male 16.8
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 16.6
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 16.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 16.1
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 16.0
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 15.7
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 15.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

39.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 39.3
FF:10014-101C5 62,83,84 years, mixed 39.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.