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PXN

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:60.8TPM
GTEx:42.4RPKM
FANTOM5:113.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody CAB003841

  

Endothelial cells

 High  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

60.8
overview Male, age 54 Sample 1
TPM: 57.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 71.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 74.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 64.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 34
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 58.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 62.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 62.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 58.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 52.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 76.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 60.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 58
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

42.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 45.6
Samples: 149

Max RPKM: 82.9
Min RPKM: 21.2
Std RPKM: 14.2
Median RPKM: 42.9
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 82.9
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 80.0
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 79.7
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 78.7
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 77.5
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 76.2
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 75.3
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 73.9
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 73.2
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 70.7
Show all
Colon - Transverse
RPKM: 39.9
Samples: 196

Max RPKM: 72.0
Min RPKM: 27.1
Std RPKM: 7.3
Median RPKM: 38.9
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 72.0
GTEX-S341-1426-SM-4AD6U 40-49 years, female 65.4
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 64.7
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 63.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 63.1
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 59.6
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 59.4
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 54.9
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 53.7
GTEX-11GSP-1626-SM-5986N 60-69 years, female 53.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

113.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 113.0
FF:10014-101C5 62,83,84 years, mixed 113.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.