Tissue expression of FH - Staining in adipose tissue - The Human Protein Atlas

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FH

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TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	47.7	TPM
GTEx:	23.5	RPKM
FANTOM5:	56.7	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Low
Peripheral nerve:	Low
Chondrocytes:	Not available

Antibody staining	Antibody HPA025770		Antibody HPA025948		Antibody HPA027341		Antibody CAB017785
Adipocytes	Not detected		Not detected		Medium		Low
Fibroblasts	Not detected		Not detected		Medium		Medium
Peripheral nerve	Not detected		Not detected		Medium		Not detected
Chondrocytes	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not available
Fibroblasts:	Low
Peripheral nerve:	Low

Antibody staining	Antibody HPA025770		Antibody HPA025948		Antibody HPA027341		Antibody CAB017785
Adipocytes	Not detected		Not detected		Low		Not detected
Fibroblasts	Not detected		Not detected		High		Low
Peripheral nerve	Not detected		Low		Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	47.7

N/A

Female, age 80

Sample 1
TPM: 48.7

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 52

N/A

Female, age 57

Sample 3
TPM: 50.3

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 53.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 33.9

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	23.5

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 23.4

Samples: 350

Max RPKM: 40.5
Min RPKM: 11.1
Std RPKM: 4.8
Median RPKM: 23.0

GTEX-WY7C-2426-SM-3NB2V

50-59 years, male

40.5

GTEX-ZP4G-2326-SM-57WEM

20-29 years, female

39.5

GTEX-Y5V6-2526-SM-5IFJV

60-69 years, male

37.4

GTEX-11P82-1726-SM-5Q5AT

20-29 years, male

36.5

GTEX-OHPN-0226-SM-48TBV

60-69 years, female

36.2

GTEX-ZT9X-1926-SM-57WE7

40-49 years, male

35.2

GTEX-11EMC-2826-SM-5PNY6

60-69 years, female

35.0

GTEX-ZQG8-1526-SM-5HL65

60-69 years, female

35.0

GTEX-ZYY3-0226-SM-5E45M

60-69 years, female

34.9

GTEX-T5JW-1726-SM-3GADN

20-29 years, female

34.8

Show all

Adipose - Visceral (Omentum)
RPKM: 23.7

Samples: 227

Max RPKM: 57.0
Min RPKM: 11.6
Std RPKM: 7.0
Median RPKM: 22.5

GTEX-Y5LM-0826-SM-4VDSW

40-49 years, female

57.0

GTEX-ZLWG-0726-SM-5S2NG

50-59 years, female

45.5

GTEX-13X6H-1726-SM-5Q5EH

50-59 years, female

42.5

GTEX-XV7Q-1726-SM-4BRUU

40-49 years, female

42.0

GTEX-133LE-0926-SM-5P9J1

20-29 years, female

41.7

GTEX-1122O-0926-SM-5N9C9

60-69 years, female

40.7

GTEX-12696-1826-SM-5EGJS

60-69 years, male

40.1

GTEX-11I78-0226-SM-5HL6R

50-59 years, female

39.9

GTEX-11DXX-2026-SM-5EGJL

60-69 years, female

39.3

GTEX-132QS-0826-SM-5K7WV

60-69 years, male

37.8

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	56.7

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 56.7

65,65,76 years, mixed

56.7

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.