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TISSUE ATLAS PRIMARY DATA KIDNEY
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:104.9TPM
GTEx:35.8RPKM
FANTOM5:123.7Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Low
Cells in tubules:High
 

Antibody staining

Antibody HPA025770

 

Antibody HPA025948

 

Antibody HPA027341

 

Antibody CAB017785

 

Cells in glomeruli

Not detected   Not detected   Medium   Low  

Cells in tubules

High   Medium   High   High  
       
       
       

KIDNEY - HPA RNA-seq

Average TPM

104.9

overview Female, age 58 Sample 1
TPM: 106.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67 Sample 2
TPM: 81.9
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55 Sample 3
TPM: 70.3
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46 Sample 4
TPM: 72.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57 Sample 5
TPM: 100
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 6
TPM: 132.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73 Sample 7
TPM: 116.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59 Sample 8
TPM: 131.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48 Sample 9
TPM: 132.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

35.8

GTEx sample id

Sample description

RPKM

Kidney - Cortex
RPKM: 35.8
Samples: 32

Max RPKM: 73.9
Min RPKM: 9.9
Std RPKM: 13.7
Median RPKM: 35.4
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 73.9
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 58.5
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 53.0
GTEX-N7MS-1626-SM-3LK5F 60-69 years, male 51.1
GTEX-QLQW-1626-SM-4R1K1 30-39 years, male 49.4
GTEX-12696-0926-SM-5FQTV 60-69 years, male 48.2
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 47.2
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 44.5
GTEX-UPIC-1126-SM-4IHLO 20-29 years, female 43.9
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 43.7
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 43.4
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 39.2
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 38.5
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 38.4
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 36.9
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 35.5
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 35.3
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 34.7
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 32.9
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 32.7
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 31.6
GTEX-13112-2126-SM-5GCO4 50-59 years, male 31.3
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 28.9
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 26.0
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 25.0
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 24.5
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 21.3
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 20.8
GTEX-RN64-1626-SM-48FD7 50-59 years, male 18.8
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 17.6
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 10.1
GTEX-ZYFD-1526-SM-5NQ7T 50-59 years, male 9.9
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

123.7

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 123.7
FF:10017-101C8 60,62,63 years, female 123.7

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