We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
EZR
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:75.0TPM
GTEx:26.5RPKM
FANTOM5:26.5Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA021616

 

Antibody CAB004035

 

Adipocytes

Not detected   Not detected  

Glandular cells

Medium   High  

Myoepithelial cells

Medium   Low  
   
   
   

BREAST - HPA RNA-seq

Average TPM

75.0

overview Female, age 52 Sample 1
TPM: 61.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 97.4
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 92.1
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 49.2
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

26.5

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 26.5
Samples: 214

Max RPKM: 112.2
Min RPKM: 7.9
Std RPKM: 12.2
Median RPKM: 23.6
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 112.2
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 59.6
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 59.5
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 59.1
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 56.7
GTEX-T6MN-0726-SM-32PML 50-59 years, male 54.8
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 51.0
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 50.9
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 49.9
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 49.0
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 49.0
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 48.7
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 46.6
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 46.1
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 45.8
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 43.7
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 43.6
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 43.1
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 42.3
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 42.3
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 41.7
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 41.2
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 41.0
GTEX-QEL4-2126-SM-447AE 50-59 years, male 40.7
GTEX-111YS-1926-SM-5GICC 60-69 years, male 40.4
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 40.2
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 39.1
GTEX-11EI6-0626-SM-5985T 60-69 years, male 38.6
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 38.6
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 38.6
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 38.5
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 38.4
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 38.4
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 38.2
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 37.8
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 37.5
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 37.5
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 36.6
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 36.4
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 36.2
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 36.2
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 36.0
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 35.9
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 35.8
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 35.8
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 35.5
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 35.3
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 35.1
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 35.1
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 34.1
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 33.9
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 33.9
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 33.7
GTEX-RU72-0626-SM-46MUI 50-59 years, female 33.7
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 33.4
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 33.3
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 32.8
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 32.5
GTEX-XBED-1626-SM-47JYN 60-69 years, male 32.5
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 32.2
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 32.0
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 31.5
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 31.5
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 31.1
GTEX-S341-1526-SM-4AD6K 40-49 years, female 30.7
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 30.7
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 30.6
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 30.3
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 29.2
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 28.9
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 28.8
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 28.4
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 28.4
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 28.3
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 28.2
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 28.1
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 27.8
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 27.7
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 27.6
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 27.4
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 27.3
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 27.1
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 27.1
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 27.1
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 26.9
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 26.6
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 26.4
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 26.3
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 26.3
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 26.2
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 25.9
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 25.7
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 25.6
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 25.6
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 25.4
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 25.4
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 25.2
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 25.0
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 24.8
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 24.8
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 24.7
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 24.7
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 24.2
GTEX-11P81-1926-SM-5BC53 30-39 years, female 24.1
GTEX-1192X-2326-SM-5987X 50-59 years, male 23.9
GTEX-13113-1726-SM-5GCOO 60-69 years, female 23.9
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 23.7
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 23.4
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 23.3
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 23.2
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 23.1
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 23.0
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 23.0
GTEX-TML8-1226-SM-32QON 40-49 years, female 22.6
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 22.4
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 22.2
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 22.0
GTEX-117XS-1926-SM-5GICO 60-69 years, male 21.9
GTEX-11OF3-1926-SM-59889 60-69 years, male 21.9
GTEX-14753-2426-SM-5LU8U 60-69 years, male 21.9
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 21.8
GTEX-1122O-1226-SM-5H113 60-69 years, female 21.6
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 21.4
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 21.3
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 21.3
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 21.2
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 21.1
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 21.0
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 20.9
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 20.9
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 20.5
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 20.5
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 20.5
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 20.4
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 20.3
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 20.2
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 20.0
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 20.0
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 20.0
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 19.8
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 19.8
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 19.7
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 19.5
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 19.4
GTEX-R53T-1526-SM-48FEK 50-59 years, female 19.4
GTEX-X261-0626-SM-3NMD9 50-59 years, male 19.4
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 19.2
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 19.2
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 19.0
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 19.0
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 19.0
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 18.9
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 18.9
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 18.2
GTEX-REY6-2426-SM-48FF5 60-69 years, male 17.9
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 17.9
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 17.9
GTEX-QVJO-1826-SM-447C9 60-69 years, female 17.8
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 17.8
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 17.6
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 17.6
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 17.6
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 17.6
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 17.5
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 17.3
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 17.2
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 17.2
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 17.0
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 16.8
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 16.8
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 16.7
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 16.7
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 16.6
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 16.5
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 16.5
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 16.5
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 16.4
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 16.3
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 16.2
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 16.0
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 15.9
GTEX-117YX-1426-SM-5H12H 50-59 years, male 15.7
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 15.7
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 15.7
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 15.7
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 15.5
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 15.4
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 15.4
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 15.2
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 15.1
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 15.1
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 15.0
GTEX-R55D-0826-SM-48FEA 50-59 years, male 15.0
GTEX-WFON-1826-SM-3GILG 40-49 years, male 15.0
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 14.7
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 14.6
GTEX-11P82-1326-SM-5HL62 20-29 years, male 14.5
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 14.4
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 14.3
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 13.6
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 13.4
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 13.3
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 13.2
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 13.1
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 12.8
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 12.6
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 12.6
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 12.3
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 11.7
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 11.5
GTEX-144GM-0926-SM-5O994 20-29 years, male 10.9
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 9.4
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 8.3
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 7.9
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

26.5

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 26.5
FF:10080-102A8 77 years, female 26.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.