We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
EZR
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:289.5TPM
GTEx:148.5RPKM
FANTOM5:481.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA021616

 

Antibody CAB004035

 

Antibody CAB047324

 

Glandular cells

High   Medium   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

289.5

overview Male, age 65 Sample 1
TPM: 214
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 346.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 261.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 336.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

148.5

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 148.5
Samples: 88

Max RPKM: 329.5
Min RPKM: 17.7
Std RPKM: 77.5
Median RPKM: 146.4
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 329.5
GTEX-ZTSS-0926-SM-59865 40-49 years, male 324.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 300.3
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 286.6
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 274.6
GTEX-1122O-1326-SM-5H11F 60-69 years, female 268.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 264.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 261.5
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 260.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 257.3
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 246.9
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 240.3
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 237.0
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 236.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 233.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 231.4
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 223.6
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 222.1
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 215.2
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 210.7
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 209.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 207.3
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 206.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 203.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 203.0
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 201.3
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 200.9
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 198.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 193.0
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 184.7
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 180.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 175.5
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 173.6
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 169.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 168.8
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 168.2
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 161.7
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 161.5
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 160.4
GTEX-13113-1226-SM-5EGHT 60-69 years, female 157.8
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 156.3
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 154.3
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 153.7
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 150.2
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 142.7
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 142.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 140.8
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 138.2
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 134.8
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 124.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 122.4
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 119.7
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 119.1
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 119.1
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 112.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 101.5
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 101.2
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 100.5
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 99.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 98.3
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 97.9
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 91.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 89.6
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 88.4
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 86.9
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 82.9
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 82.6
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 81.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 81.0
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 80.4
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 77.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 70.6
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 64.8
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 60.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 57.7
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 56.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 55.9
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 55.7
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 54.8
GTEX-117YX-0326-SM-5GICL 50-59 years, male 51.6
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 42.3
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 40.2
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 37.3
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 33.0
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 32.7
GTEX-13111-1426-SM-5DUW3 50-59 years, male 27.7
GTEX-1192X-2526-SM-59868 50-59 years, male 25.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 17.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

481.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 481.9
FF:10024-101D6 15,40,85 years, mixed 481.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.