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GPATCH2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.7TPM
GTEx:1.5RPKM
FANTOM5:18.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
Chondrocytes:Low
 

Antibody staining

Antibody HPA027181

  

Antibody HPA027322

  

Adipocytes

 Low   Medium  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Low   Low  

Chondrocytes

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA027181

  

Antibody HPA027322

  

Adipocytes

 Medium   Medium  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Medium   Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

4.7
N/A Female, age 80 Sample 1
TPM: 4.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 4
N/A Female, age 57 Sample 3
TPM: 3.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 6.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 5.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

1.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 1.6
Samples: 350

Max RPKM: 2.9
Min RPKM: 0.9
Std RPKM: 0.3
Median RPKM: 1.5
GTEX-OXRO-0226-SM-3LK6F 60-69 years, female 2.9
GTEX-QDT8-0226-SM-32PL4 30-39 years, female 2.8
GTEX-13PLJ-0126-SM-5L3HU 60-69 years, female 2.6
GTEX-11PRG-0626-SM-5BC56 50-59 years, male 2.5
GTEX-OIZI-0226-SM-2XCEE 40-49 years, male 2.5
GTEX-X5EB-2426-SM-4E3HX 40-49 years, male 2.4
GTEX-ZYFC-0326-SM-5NQ7H 50-59 years, male 2.4
GTEX-12WSM-0226-SM-5LZV6 60-69 years, male 2.3
GTEX-139TU-0226-SM-5J1NM 60-69 years, male 2.3
GTEX-14BIL-0226-SM-5SI9E 50-59 years, male 2.3
Show all
Adipose - Visceral (Omentum)
RPKM: 1.4
Samples: 227

Max RPKM: 2.8
Min RPKM: 0.7
Std RPKM: 0.4
Median RPKM: 1.3
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 2.8
GTEX-11DXY-0326-SM-5H12F 60-69 years, male 2.7
GTEX-117YW-0826-SM-5H11O 50-59 years, male 2.5
GTEX-1399T-1326-SM-5PNVH 60-69 years, male 2.5
GTEX-YECK-1426-SM-5IFHE 60-69 years, male 2.5
GTEX-14A6H-1026-SM-5SIAZ 30-39 years, male 2.4
GTEX-WK11-2426-SM-3NMAA 50-59 years, male 2.4
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 2.3
GTEX-12584-2126-SM-5FQUM 40-49 years, male 2.3
GTEX-13O3Q-1126-SM-5K7YK 50-59 years, male 2.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

18.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 18.9
FF:10010-101C1 65,65,76 years, mixed 18.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.