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HDAC6

CEREBRAL CORTEX - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:35.1TPM
GTEx:15.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Low
 

Antibody staining

Antibody HPA003714

  

Antibody HPA026321

  

Antibody CAB004236

  

Endothelial cells

 Not detected   Low   Medium  

Glial cells

 Not detected   Not detected   Not detected  

Neuronal cells

 Not detected   Low   Medium  

Neuropil

 Medium   Low   Low  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

35.1
N/A Male, age 5 Sample 1
TPM: 20.3
overview Female, age 40 Sample 2
TPM: 56.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 28.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

15.0

GTEx sample id

Sample description

RPKM
Brain - Cortex
RPKM: 17.7
Samples: 114

Max RPKM: 40.6
Min RPKM: 9.6
Std RPKM: 4.0
Median RPKM: 17.2
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 40.6
GTEX-X585-3026-SM-46MWF 50-59 years, male 29.9
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 27.6
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 25.3
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 24.4
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 24.2
GTEX-144FL-3026-SM-5O99C 50-59 years, male 23.9
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 23.8
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 23.7
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 23.7
Show all
Brain - Frontal Cortex (BA9)
RPKM: 12.1
Samples: 108

Max RPKM: 20.0
Min RPKM: 4.5
Std RPKM: 2.8
Median RPKM: 12.3
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 20.0
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 17.8
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 17.6
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 17.5
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 17.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 16.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 16.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 16.1
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 15.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 15.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.