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PTGS1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:21.5TPM
GTEx:48.3RPKM
FANTOM5:141.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA002834

  

Antibody CAB020315

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Low   Medium  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

21.5
overview Male, age 54 Sample 1
TPM: 13.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 14.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 73.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 28.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 14.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 25
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 33.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 18.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

48.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 77.0
Samples: 149

Max RPKM: 232.8
Min RPKM: 4.7
Std RPKM: 38.7
Median RPKM: 71.4
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 232.8
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 211.8
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 195.4
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 172.5
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 156.8
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 151.3
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 147.6
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 142.9
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 140.9
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 139.6
Show all
Colon - Transverse
RPKM: 26.5
Samples: 196

Max RPKM: 124.8
Min RPKM: 2.2
Std RPKM: 25.0
Median RPKM: 16.0
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 124.8
GTEX-S3XE-1126-SM-4AD4N 50-59 years, male 123.0
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 116.6
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 108.9
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 94.4
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 91.6
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 83.7
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 83.7
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 80.6
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 77.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

141.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 141.3
FF:10014-101C5 62,83,84 years, mixed 141.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.