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CDC5L

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.4TPM
GTEx:6.5RPKM
FANTOM5:50.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA006302

  

Antibody HPA011361

  

Antibody CAB012275

  

Endothelial cells

 Medium   Low   Low  

Glandular cells

 High   High   High  

Peripheral nerve/ganglion

 Medium   Medium   Medium  
     
     
     

COLON - HPA RNA-seq

Average TPM

10.4
overview Male, age 54 Sample 1
TPM: 10.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 8.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 9.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 12
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 13.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 8.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.5

GTEx sample id

Sample description

RPKM
6.06.97.74.29.601234567891011
Colon - Sigmoid
RPKM: 6.9
Samples: 149

Max RPKM: 11.6
Min RPKM: 4.2
Std RPKM: 1.1
Median RPKM: 6.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 11.6
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 9.6
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 9.0
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 9.0
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 9.0
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 8.8
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 8.7
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 8.7
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 8.7
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 8.6
Show all
5.46.27.13.49.60123456789
Colon - Transverse
RPKM: 6.3
Samples: 196

Max RPKM: 9.6
Min RPKM: 3.4
Std RPKM: 1.2
Median RPKM: 6.1
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 9.6
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 9.5
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 9.4
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 9.3
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 9.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 9.2
GTEX-117YX-0826-SM-5H11J 50-59 years, male 8.7
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 8.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 8.7
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 8.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

50.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 50.2
FF:10014-101C5 62,83,84 years, mixed 50.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.