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LGALS1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:327.7TPM
GTEx:374.8RPKM
FANTOM5:330.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA000646

  

Antibody CAB002157

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

327.7
overview Male, age 54 Sample 1
TPM: 345.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 231.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 175.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 234.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 341.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1022
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 108.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 149.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 484.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 156.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 224.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 453.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 332.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

374.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 554.5
Samples: 149

Max RPKM: 1193.4
Min RPKM: 219.8
Std RPKM: 233.1
Median RPKM: 518.3
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 1193.4
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 1158.8
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 1083.5
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 1007.4
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 1005.9
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 991.1
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 948.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 942.7
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 940.4
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 931.6
Show all
Colon - Transverse
RPKM: 238.2
Samples: 196

Max RPKM: 1258.4
Min RPKM: 27.1
Std RPKM: 216.6
Median RPKM: 163.6
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 1258.4
GTEX-11GSP-1626-SM-5986N 60-69 years, female 1218.9
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 872.0
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 833.6
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 814.1
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 777.3
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 716.6
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 693.3
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 691.8
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 678.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

330.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 330.1
FF:10014-101C5 62,83,84 years, mixed 330.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.