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ANKRD54

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.6TPM
GTEx:8.6RPKM
FANTOM5:18.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA071287

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

7.6
overview Male, age 54 Sample 1
TPM: 9.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 9.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 10.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 6.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 9.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.5
Samples: 149

Max RPKM: 15.8
Min RPKM: 4.0
Std RPKM: 2.4
Median RPKM: 9.4
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 15.8
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 14.6
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 14.5
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 14.3
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 14.3
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 14.3
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 14.3
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 14.2
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 14.0
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 13.7
Show all
Colon - Transverse
RPKM: 7.8
Samples: 196

Max RPKM: 13.9
Min RPKM: 3.1
Std RPKM: 1.6
Median RPKM: 7.8
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 13.9
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 12.8
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 12.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 12.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 11.8
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 11.7
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 11.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 11.2
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 11.1
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 11.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

18.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 18.5
FF:10014-101C5 62,83,84 years, mixed 18.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.