Tissue expression of LGMN - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	106.7	TPM
GTEx:	31.2	RPKM
FANTOM5:	155.2	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Low

Antibody staining	Antibody HPA001426
Glandular cells	Low

SMALL INTESTINE - HPA RNA-seq

Average TPM	106.7

Male, age 65

Sample 1
TPM: 92.5

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 87.2

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 135.7

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 111.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	31.2

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 31.2

Samples: 88

Max RPKM: 69.0
Min RPKM: 11.6
Std RPKM: 9.0
Median RPKM: 30.5

GTEX-VJYA-0926-SM-4KL1N

60-69 years, male

69.0

GTEX-YEC4-1726-SM-4W21E

40-49 years, male

57.3

GTEX-13113-1226-SM-5EGHT

60-69 years, female

47.6

GTEX-XMK1-1826-SM-4B66F

40-49 years, male

46.6

GTEX-ZTPG-2626-SM-57WFX

20-29 years, female

45.7

GTEX-13PL7-2626-SM-5IFH4

60-69 years, female

45.3

GTEX-XXEK-1026-SM-4BRUW

50-59 years, male

42.6

GTEX-11P82-0826-SM-5P9GU

20-29 years, male

42.5

GTEX-11P7K-1626-SM-5GU63

30-39 years, male

42.4

GTEX-139YR-2226-SM-5IFFW

50-59 years, male

42.4

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	155.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 155.2

FF:10024-101D6

15,40,85 years, mixed

155.2