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APEX1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:86.2TPM
GTEx:38.5RPKM
FANTOM5:123.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
Chondrocytes:Low
 

Antibody staining

Antibody HPA002564

  

Antibody CAB004294

  

Antibody CAB047307

  

Adipocytes

 High   Medium   Low  

Fibroblasts

 High   Medium   Medium  

Peripheral nerve

 High   Medium   Medium  

Chondrocytes

 Low  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Medium
Peripheral nerve:Medium
Adipocytes:Medium
 
 

Antibody staining

Antibody HPA002564

  

Antibody CAB004294

  

Antibody CAB047307

  

Fibroblasts

 High   Medium   Medium  

Peripheral nerve

 High   Medium   High  

Adipocytes

 Medium   Medium  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

86.2
N/A Female, age 80 Sample 1
TPM: 93.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 82.3
N/A Female, age 57 Sample 3
TPM: 62
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 124
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 69.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

38.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 40.5
Samples: 350

Max RPKM: 62.5
Min RPKM: 23.4
Std RPKM: 6.6
Median RPKM: 40.1
GTEX-12C56-1626-SM-5FQUO 20-29 years, male 62.5
GTEX-148VI-1726-SM-5S2W9 60-69 years, female 58.8
GTEX-POMQ-2326-SM-5S2VS 20-29 years, female 57.7
GTEX-111CU-1826-SM-5GZYN 50-59 years, male 57.1
GTEX-SUCS-1826-SM-32PM1 70-79 years, male 57.0
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 55.8
GTEX-146FH-0226-SM-5QGPQ 50-59 years, female 55.6
GTEX-P4PP-0226-SM-5S2VR 30-39 years, female 55.5
GTEX-OOBK-0226-SM-2YUMF 40-49 years, male 55.1
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 54.4
Show all
Adipose - Visceral (Omentum)
RPKM: 35.5
Samples: 227

Max RPKM: 73.0
Min RPKM: 18.3
Std RPKM: 8.8
Median RPKM: 34.9
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 73.0
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 71.1
GTEX-12696-1826-SM-5EGJS 60-69 years, male 66.2
GTEX-ZZPU-0326-SM-5N9BJ 50-59 years, female 63.5
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 62.1
GTEX-ZLWG-0726-SM-5S2NG 50-59 years, female 58.8
GTEX-117YX-0726-SM-5GIET 50-59 years, male 56.6
GTEX-11DXX-2026-SM-5EGJL 60-69 years, female 52.4
GTEX-133LE-0926-SM-5P9J1 20-29 years, female 51.2
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 49.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

123.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 123.1
FF:10010-101C1 65,65,76 years, mixed 123.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.