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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:30.4TPM
GTEx:12.1RPKM
FANTOM5:35.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Not detected
Adipocytes:Not detected
 
 

Antibody staining

Antibody HPA051162

  

Antibody HPA053502

  

Antibody CAB018734

  

Chondrocytes

 Low   Medium  

Fibroblasts

 Not detected   Low   Not detected  

Peripheral nerve

 Not detected   Medium   Not detected  

Adipocytes

 Not detected  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA051162

  

Antibody HPA053502

  

Antibody CAB018734

  

Adipocytes

 Not detected   Not detected   Not detected  

Chondrocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Low   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

30.4
N/A Female, age 80 Sample 1
TPM: 43.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 24.9
N/A Female, age 57 Sample 3
TPM: 23.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 27
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 33.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

12.1

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 12.7
Samples: 350

Max RPKM: 61.5
Min RPKM: 2.7
Std RPKM: 7.3
Median RPKM: 11.0
GTEX-ZVT2-2226-SM-5NQ6P 50-59 years, female 61.5
GTEX-R55G-2426-SM-2TC5I 40-49 years, female 43.1
GTEX-YB5E-2126-SM-5IFI7 40-49 years, male 39.2
GTEX-13D11-2326-SM-5IJCY 50-59 years, female 38.2
GTEX-PLZ6-1326-SM-3NB24 30-39 years, male 38.2
GTEX-S4UY-0226-SM-3K2AP 40-49 years, female 33.6
GTEX-11P7K-2026-SM-5GU74 30-39 years, male 33.4
GTEX-PWOO-2226-SM-2S1P1 40-49 years, female 33.2
GTEX-13QBU-2526-SM-5LU4X 40-49 years, female 32.9
GTEX-PWN1-0226-SM-5SI7O 40-49 years, female 31.4
Show all
Adipose - Visceral (Omentum)
RPKM: 11.3
Samples: 227

Max RPKM: 56.8
Min RPKM: 1.9
Std RPKM: 8.0
Median RPKM: 9.0
GTEX-11EQ9-1126-SM-5987I 30-39 years, male 56.8
GTEX-1211K-1226-SM-5EQ4N 60-69 years, female 40.8
GTEX-XMK1-0926-SM-4B66X 40-49 years, male 35.9
GTEX-XV7Q-1726-SM-4BRUU 40-49 years, female 33.7
GTEX-13FH7-1926-SM-5J2OL 50-59 years, female 33.3
GTEX-12C56-0826-SM-5EGJ5 20-29 years, male 29.3
GTEX-ZQUD-0526-SM-57WG4 30-39 years, male 29.3
GTEX-ZVT2-0226-SM-5GIE3 50-59 years, female 28.5
GTEX-W5X1-1426-SM-3GIKH 40-49 years, female 28.3
GTEX-13FTW-0426-SM-5K7X2 40-49 years, male 28.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

35.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 35.2
FF:10010-101C1 65,65,76 years, mixed 35.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.