Tissue expression of PRPF6 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	34.7	TPM
GTEx:	32.3	RPKM
FANTOM5:	120.2	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Medium

Antibody staining	Antibody HPA047106
Glandular cells	Medium

SMALL INTESTINE - HPA RNA-seq

Average TPM	34.7

Male, age 65

Sample 1
TPM: 29.5

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 36.1

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 38.9

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 34.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	32.3

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 32.3

Samples: 88

Max RPKM: 46.5
Min RPKM: 21.7
Std RPKM: 5.5
Median RPKM: 31.1

GTEX-11NSD-1726-SM-5N9C3

20-29 years, male

46.5

GTEX-11VI4-1626-SM-5EQKO

40-49 years, female

46.2

GTEX-X15G-1426-SM-4PQZK

50-59 years, female

45.7

GTEX-WFJO-0926-SM-4LVM2

30-39 years, male

43.7

GTEX-11XUK-1426-SM-5EQMG

40-49 years, female

43.4

GTEX-WH7G-1626-SM-4LVMY

40-49 years, male

42.8

GTEX-13O61-1326-SM-5KM31

60-69 years, male

41.4

GTEX-WRHK-1026-SM-4MVOD

20-29 years, female

41.4

GTEX-13FH7-1226-SM-5IJFK

50-59 years, female

40.4

GTEX-12BJ1-1926-SM-5HL9Z

60-69 years, male

39.9

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	120.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 120.2

FF:10024-101D6

15,40,85 years, mixed

120.2